HIPAA-Compliant AI Note Apps Ranked (2025): Complete Security Comparison

HIPAA compliance isn't optional for AI medical note apps—it's legally mandated for any technology handling protected health information. Yet many AI therapy note platforms lack transparent security documentation, proper Business Associate Agreements, or adequate encryption standards, exposing mental health professionals to devastating regulatory fines (up to $1.9 million per violation) and malpractice liability. This comprehensive ranking evaluates the top AI note apps for HIPAA compliance, comparing encryption standards, privacy policies, and security validation—explaining why s10.ai leads with ISO 27001 certification, zero audio storage, and military-grade AES-256 encryption.

Understanding HIPAA Requirements for AI Note Apps

Critical HIPAA Safeguards

AI note apps must implement three categories of safeguards:

Administrative Safeguards:

• Security management process with risk assessments
• Workforce security and access authorization
• Business Associate Agreements (BAA) with all customers
• Security incident response procedures
• Regular security training

Physical Safeguards:

• Secured data center facilities
• Workstation and device security
• Media disposal procedures

Technical Safeguards:

• Access controls with unique user IDs
• Comprehensive audit trails
• Data integrity controls
• Encryption for data in transit and at rest

Why HIPAA Compliance Matters for Therapists

Legal Requirements: Federal law mandates HIPAA compliance for covered entities (therapists) and business associates (software vendors handling PHI).

Financial Penalties:

• Tier 1: $100-$50,000 per violation
• Tier 4 (willful neglect): $50,000+ per violation
• Maximum annual penalty: $1.9 million per violation type

Professional Liability: Non-compliant AI note use exposes therapists to:

• Malpractice claims
• Professional license action
• Breach notification costs
• Reputation damage

HIPAA-Compliant AI Note Apps Ranked

#1: s10.ai – Best Overall HIPAA Compliance

HIPAA Compliance Score: 10/10

Security Features:

• ✅ ISO 27001 Certified – Independently verified security management
• ✅ Zero Audio Storage – Real-time processing, no permanent recordings
• ✅ AES-256 Encryption – Military-grade data protection
• ✅ TLS 1.3 Transit Encryption – Highest-level secure transmission
• ✅ Automatic BAA – Included with all subscriptions at no extra cost
• ✅ Multi-Factor Authentication – Required for all users
• ✅ SOC 2 Type II Infrastructure – Built on AWS certified data centers
• ✅ Comprehensive Audit Trails – All PHI access logged
• ✅ 99.9% Uptime SLA – Fault-tolerant architecture
• ✅ 24/7 Security Monitoring – Rapid incident detection

Privacy Advantages:

• No permanent audio recordings – Eliminates primary breach risk
• De-identified data processing – PHI anonymized for AI training
• Configurable data retention – Customer-controlled note storage
• GDPR & PIPEDA compliant – International privacy standards

Pricing: $99/month unlimited notes (no BAA premium)

Best For: Therapists, psychiatrists, and mental health professionals requiring highest security standards without premium pricing.

Compliance Documentation: ISO 27001 certificate available upon request; BAA provided automatically during onboarding.

#2: Mentalyc – Strong Privacy Focus

HIPAA Compliance Score: 9/10

Security Features:

• ✅ HIPAA Compliant – Full Privacy/Security Rule adherence
• ✅ BAA Provided – Included with subscription
• ✅ Automatic PII Removal – Strips identifying information
• ✅ Post-Transcription Audio Deletion – Audio removed after processing
• ✅ AES-256 Encryption – Data at rest protection
• ✅ Multi-National Compliance – US, Canada, UK, Australia, NZ, South Africa, GCC

Privacy Advantages:

• Automatically removes personally identifying information
• Deletes audio recordings after transcription
• Encrypted data storage
• Multi-country privacy compliance

Pricing: $13.49-$99.99/month depending on caseload

Best For: International mental health professionals needing multi-country compliance.

Limitation: Slower than s10.ai (2-3 minutes vs. 10 seconds processing).

#3: Supanote – HIPAA Verified by Third Party

HIPAA Compliance Score: 8.5/10

Security Features:

• ✅ HIPAA Compliant – Third-party auditor verified
• ✅ BAA Provided – Included with subscription
• ✅ No Personal Data Storage – Extensive security measures
• ✅ Encryption – Data protection standards met

Privacy Advantages:

• Third-party security verification
• No permanent personal data storage
• Encrypted transmission and storage

Pricing: $40/month for 120 notes; free plan available (10 notes/month)

Best For: Budget-conscious therapists needing HIPAA compliance with free tier testing.

Limitation: Less transparent security documentation than s10.ai or Mentalyc.

#4: Upheal – Comprehensive Privacy Controls

HIPAA Compliance Score: 8.5/10

Security Features:

• ✅ HIPAA Compliant – Full Privacy/Security Rule compliance
• ✅ BAA Provided – Signed with all users
• ✅ SOC 2 Type II Certified – Independent security audit
• ✅ Encryption – AES-256 data protection
• ✅ Privacy-First Design – Client data protection emphasis

Privacy Advantages:

• SOC 2 certification demonstrates sustained compliance
• Privacy-focused product design
• Secure telehealth integration

Pricing: Tiered pricing based on session volume

Best For: Telehealth-focused therapists prioritizing privacy.

Limitation: More expensive than s10.ai for equivalent features.

#5: TheraPlatform – All-in-One EHR Integration

HIPAA Compliance Score: 8/10

Security Features:

• ✅ HIPAA Compliant – Full EHR platform compliance
• ✅ BAA Included – Standard with platform
• ✅ Encrypted Storage – Protected data at rest
• ✅ Secure Telehealth – Integrated video with encryption

Privacy Advantages:

• Comprehensive EHR platform security
• Integrated practice management compliance
• Secure messaging and telehealth

Pricing: Platform subscription (EHR + AI notes bundled)

Best For: Practices needing full EHR platform, not standalone AI notes.

Limitation: Requires full platform adoption; AI notes not standalone product.

#6: Freed AI – Basic HIPAA Compliance

HIPAA Compliance Score: 7.5/10

Security Features:

• ✅ HIPAA Compliant – Basic Privacy/Security Rule adherence
• ✅ BAA Provided – Available upon request
• ✅ Encryption – Standard data protection

Privacy Advantages:

• Basic HIPAA requirements met
• Simple compliance documentation

Pricing: $99/month unlimited

Best For: Primary care physicians needing basic HIPAA compliance.

Limitation: Less detailed security documentation; no ISO 27001 or SOC 2 certification; not therapy-specific.

#7: AutoNotes – Fast Processing with Compliance

HIPAA Compliance Score: 7.5/10

Security Features:

• ✅ HIPAA Compliant – Privacy/Security Rule adherence
• ✅ BAA Available – Provided to users
• ✅ 10-Second Processing – Fast note generation

Privacy Advantages:

• Very fast processing reduces exposure time
• Basic HIPAA safeguards met

Pricing: Subscription-based

Best For: Therapists prioritizing speed with basic compliance.

Limitation: Limited security documentation transparency.

#8: SOAPNoteAI – HIPAA Compliant with APTA Pledge

HIPAA Compliance Score: 7/10

Security Features:

• ✅ HIPAA Compliant – Privacy/Security Rule compliance
• ✅ APTA Digital Health Pledge – Professional organization commitment
• ✅ Encryption – Data protection standards

Privacy Advantages:

• Professional association commitment
• Multi-specialty note support

Pricing: Monthly or pay-as-you-go

Best For: Physical therapists, occupational therapists, allied health.

Limitation: Less therapy-specific than mental health platforms; limited security detail.

⚠️ AI Note Apps to Avoid

Generic AI Writing Tools (ChatGPT, Claude, etc.):

• ❌ No BAA Available – OpenAI, Anthropic won't sign BAAs for consumer accounts
• ❌ Data Used for Training – Your patient data may train AI models
• ❌ No HIPAA Compliance – Explicitly excluded from privacy protections
• ❌ Severe Legal Risk – HIPAA violation using these for PHI

Free AI Transcription Tools Without BAAs:

• ❌ No Business Associate Agreement – Legal requirement missing
• ❌ Unknown Data Storage – Unclear where patient data goes
• ❌ No Encryption Guarantees – PHI potentially unprotected
• ❌ Zero Liability Coverage – No recourse if breach occurs

HIPAA Compliance Checklist for Therapists

Before using any AI note app, verify:

1. Business Associate Agreement (BAA)

✓ BAA provided automatically (not "available upon request")
✓ Covers all PHI handling including AI processing
✓ Specifies breach notification timeline and procedures
✓ Includes subcontractor coverage if vendor uses third-party AI

s10.ai: BAA provided automatically at signup, no additional cost.

2. Encryption Standards

✓ AES-256 encryption at rest (minimum standard)
✓ TLS 1.2+ in transit (preferably TLS 1.3)
✓ End-to-end encryption for sensitive data flows
✓ Key rotation policies documented

s10.ai: AES-256 + TLS 1.3 with AWS KMS automatic key rotation.

3. Audio/Data Storage Policies

✓ Audio retention clearly stated (prefer zero storage)
✓ Note retention configurable (customer-controlled)
✓ Data deletion procedures documented
✓ Backup security encrypted and access-controlled

s10.ai: Zero audio storage (real-time processing only); customer-controlled note retention.

4. Access Controls

✓ Multi-factor authentication available or required
✓ Role-based access for team accounts
✓ Automatic session timeout configured
✓ Audit trails tracking all PHI access

s10.ai: MFA required; comprehensive audit logging; automatic timeout.

5. Third-Party Security Validation

✓ ISO 27001 certification (highly desirable)
✓ SOC 2 Type II report (demonstrates sustained compliance)
✓ HITRUST CSF (gold standard, rare)
✓ Regular penetration testing disclosed

s10.ai: ISO 27001 certified; SOC 2 Type II infrastructure (AWS); annual security audits.

6. Incident Response

✓ Breach notification procedures documented
✓ 24/7 security monitoring in place
✓ Incident response team identified
✓ Breach notification timeline ≤60 days (HIPAA requirement)

s10.ai: 24/7 SOC monitoring; 24-48 hour breach notification; detailed incident response plan.

Common HIPAA Compliance Mistakes

Mistake #1: Using ChatGPT/Claude for Therapy Notes

Risk: Severe HIPAA violation—these tools don't offer BAAs and use data for training.

Solution: Use only HIPAA-compliant AI note platforms designed for healthcare (s10.ai, Mentalyc, Supanote, etc.).

Mistake #2: Accepting "HIPAA Compliant" Without Verification

Risk: Marketing claims without substance—no BAA, inadequate security.

Solution: Demand BAA before PHI exposure; verify encryption standards; review security documentation.

Mistake #3: Ignoring Audio Storage Policies

Risk: Permanent audio recordings create massive breach exposure.

Solution: Prefer platforms with zero audio storage (s10.ai) or documented post-transcription deletion (Mentalyc).

Mistake #4: No Multi-Factor Authentication

Risk: Single-factor passwords easily compromised in breaches.

Solution: Require MFA for all AI note platform access (s10.ai enforces MFA).

Mistake #5: Sharing Login Credentials

Risk: HIPAA access control violations; audit trail integrity compromised.

Solution: Ensure each team member has unique login; never share credentials.

Why s10.ai Leads HIPAA Compliance Rankings

s10.ai achieves #1 ranking through comprehensive security:

1. Highest Security Certification

ISO 27001 certification requires:

• Annual independent third-party audits
• Documented security management system
• Continuous improvement processes
• Risk-based security approach

No other AI note app in this comparison holds ISO 27001 certification.

2. Zero Audio Storage Innovation

Most AI note platforms store audio temporarily (hours to days). s10.ai processes audio in real-time then immediately discards (typically <60 seconds).

Security Benefit: Eliminates primary breach vector—no audio database to compromise.

3. Military-Grade Encryption

AES-256 encryption (same standard used by U.S. military for classified data) protects all stored PHI.

TLS 1.3 (newest encryption standard) secures all data transmission.

Security Benefit: Brute-force attack would require longer than age of universe to crack.

4. Transparent Pricing with Included BAA

Unlike competitors charging premium fees for BAA coverage, s10.ai includes comprehensive BAA at standard $99/month pricing—no compliance premium.

5. Universal EHR Integration Security

s10.ai's intelligent integration works with 100+ EHR systems while maintaining security across all platforms—no custom API vulnerabilities.

Getting Started with HIPAA-Compliant s10.ai

Deploy the most secure AI note platform for mental health:

✓ ISO 27001 certified – Independently verified security
✓ Zero audio storage – Real-time processing, no recordings
✓ AES-256 + TLS 1.3 encryption – Military-grade protection
✓ Automatic BAA – Included at no extra cost
✓ Multi-factor authentication – Required security
✓ SOC 2 infrastructure – AWS certified data centers
✓ $99/month unlimited – No compliance premium pricing
✓ 24/7 monitoring – Rapid incident detection
✓ 99.9% uptime – Fault-tolerant architecture
✓ Free consultation – Security review included

Protect your therapy practice and your clients with the highest-security AI note platform.

Book your free HIPAA compliance consultation now.

Frequently Asked Questions

Q: How do I verify an AI note app is truly HIPAA compliant?
A: Demand: (1) Written BAA before using with PHI, (2) Encryption standards documentation (AES-256 minimum), (3) Third-party security audit reports (ISO 27001, SOC 2), (4) Clear data storage and retention policies. If vendor can't provide these, don't use it.

Q: Is s10.ai really HIPAA compliant for therapy notes?
A: Yes. s10.ai maintains full HIPAA Privacy and Security Rule compliance with ISO 27001 certification, AES-256 encryption, automatic BAAs, comprehensive audit trails, and zero audio storage. All security claims are independently verified.

Q: Can I use ChatGPT for therapy notes if I don't include client names?
A: No. De-identification doesn't eliminate HIPAA requirements. Any individually identifiable health information (diagnosis, treatment details, session content) is PHI requiring HIPAA-compliant handling. ChatGPT doesn't offer BAAs and uses data for training—creating severe HIPAA violation risk.

Q: Does s10.ai store audio recordings of therapy sessions?
A: No. s10.ai employs zero audio storage—audio is processed in real-time for speech-to-text conversion, then immediately discarded (typically within 60 seconds). Only text transcripts are retained, eliminating the primary breach risk of stored audio databases.

Q: Is a Business Associate Agreement (BAA) really required for AI note apps?
A: Yes, absolutely. HIPAA requires covered entities (therapists) to execute BAAs with all vendors accessing PHI. Using AI note apps without BAAs creates direct HIPAA violation exposure with penalties up to $1.9 million annually per violation type.

Q: How much does HIPAA-compliant AI note software cost?
A: s10.ai provides comprehensive HIPAA compliance at $99/month with unlimited notes and automatic BAA inclusion. Some competitors charge $100-$200+/month with similar compliance, while therapy-specific platforms range from $13.49 (Mentalyc light caseload) to $99.99+ (heavy caseload).

Q: What happens if my AI note app has a data breach?
A: The vendor must notify you within contractually specified timeframe (s10.ai: 24-48 hours). As covered entity, you must then: (1) Notify affected clients within 60 days, (2) Report breach to HHS if affecting 500+ individuals, (3) Potentially notify media if large breach. Vendor's BAA determines their liability contribution.

Q: Can I use s10.ai for group therapy notes?
A: Yes. s10.ai handles multi-speaker sessions (group, couple, family therapy) while maintaining HIPAA compliance across all participants. Each client's PHI remains protected according to HIPAA standards regardless of session format.